Introduction | Data preparation | Add experiment information with insert_treatments() | V-shaped tunnel example | Box-shaped tunnel example | Calculating visual angles | Start by calculating distances to visual stimuli | Now get visual angles | Calculating spatial frequency | Stay tuned as additional features for image motion estimation are coming soon!

Introduction | Data preparation | Add experiment information with insert_treatments() | V-shaped tunnel example | Box-shaped tunnel example | Calculating visual angles | Start by calculating distances to visual stimuli | Now get visual angles | Calculating spatial frequency | Stay tuned as additional features for image motion estimation are coming soon!

Defining trajectories with pathviewr | Inspecting the data | Visualize frame gap choice | Autodetect

Defining trajectories with pathviewr | Inspecting the data | Visualize frame gap choice | Autodetect

Load packages and data | Visualize | Select cycles | Plot the work loop cycles | Basics of analyze_workloop() | Using the default simplify = FALSE version | Setting simpilfy = TRUE in the analyze_workloop() function | More on cycle definitions in select_cycles()

Conceptual overview | Load packages and data | Necessarily-multi-trial functions | *_dir() functions | Summarizing workloop trials | Manual recursion examples | Batch import for non-ddf data | Data transformation and analysis

Load packages | Data | Assemble via as_muscle_stim() | Attributes | Possible attributes | Thanks for reading!

Loading packages and data | Plotting workloop objects | Working with single files | Plotting isometric objects | Working with multiple files

Load packages and data | Visualize | Basics of isometric_timing() | Tetanus trials | Computing intervals | Annotate the twitch plot

Load packages and data | Visualize | Select cycles | Plot the work loop cycles | Basics of analyze_workloop() | Using the default simplify = FALSE version | Setting simpilfy = TRUE in the analyze_workloop() function | More on cycle definitions in select_cycles()

Conceptual overview | Load packages and data | Necessarily-multi-trial functions | *_dir() functions | Summarizing workloop trials | Manual recursion examples | Batch import for non-ddf data | Data transformation and analysis

Load packages | Data | Assemble via as_muscle_stim() | Attributes | Possible attributes | Thanks for reading!

Loading packages and data | Plotting workloop objects | Working with single files | Plotting isometric objects | Working with multiple files

Load packages and data | Visualize | Basics of isometric_timing() | Tetanus trials | Computing intervals | Annotate the twitch plot

Overview | What do movement data sets look like? | Data import via pathviewr | Motive CSV files | Flydra Matlab files | Data from other sources | Data cleaning | Relabeling axes, gathering data columns, and trimming outliers | Standardization of tunnel position and coordinates | Selecting a region of interest | Isolating each trajectory | Retain only complete trajectories | All-in-one cleaning functions

Overview | What do movement data sets look like? | Data import via pathviewr | Motive CSV files | Flydra Matlab files | Data from other sources | Data cleaning | Relabeling axes, gathering data columns, and trimming outliers | Standardization of tunnel position and coordinates | Selecting a region of interest | Isolating each trajectory | Retain only complete trajectories | All-in-one cleaning functions

Overview | The method and constrain_orientation arguments | method | constrain_orientation | Example 1: Unconstrained elliptical | Example 2: Constrained elliptical | Example 3: Unconstrained elliptical_log | Example 4: Constrained elliptical_log | Example 5: Circular

Overview | method = "elliptical" | method = "elliptical_log" | method = "circular"

Singular gradients | Additional control arguments to nls() | Use parameter constraints with caution

Welcome to workloopR | Analytical pipelines | Data import | Attributes | Data from files that are not of .ddf format | Transformations and corrections to data | A particularly important transformation - select_cycles() | Data analytical functions | Thanks for reading!

Welcome to workloopR | Analytical pipelines | Data import | Attributes | Data from files that are not of .ddf format | Transformations and corrections to data | A particularly important transformation - select_cycles() | Data analytical functions | Thanks for reading!